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Okay I finally found the solution I needed, posting here in case others find it useful. I ended up using the Wget command which is given from the LAADS DAAC (which stores the data but only allows queries up to 2000 files) in combination with filenames given from an Earthdata query which doesn't have...

@LaadsUserServices Thanks, I will try that WGET command and update here if it works. I used the earthdata search tool to select this data, so I guess earthdata does not point to the most updated version. Is it possible that some of the files are just missing? The download seems to 504 timeout error ...

The wget command I am trying is: wget --username=myusername --password=mypassword -i download.txt where download.txt is just a textfile with a url on each line. The first two lines are: https://ladsweb.modaps.eosdis.nasa.gov/archive/allData/6/MOD021KM/2022/006/MOD021KM.A2022006.2325.006.202200712295...

Hello, I am downloading some MODIS l1b data and consistently getting a 504 gateway timeout error when I use the "download script" option, but only after it successfully downloads anywhere from 50-200 files. When I try using 'wget --username=myusername --password=mypassword -i download.txt'...