SeaDAS 7.5 RedHat varients now useless?

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oo_processing
Posts: 208
Joined: Wed Apr 06, 2005 12:11 pm America/New_York

SeaDAS 7.5 RedHat varients now useless?

by oo_processing » Mon May 21, 2018 3:21 pm America/New_York

Don,

Are there a couple of things left out of the VIIRS build? I have issued this command:
./install_ocssw.py -v -c -i ocssw --src  --aquarius --avhrr --czcs  --goci  --hico --meris --aqua --terra  --mos  --msi  --ocm1  --ocm2 --octs --olcis3a --oli --osmi --seawifs --viirsn --viirsj1

On both a clean CentOS6 virtual machine and a clean RHEL6 cluster environment. Followed directions https://seadas.gsfc.nasa.gov/build_ocssw/rhel/
In both cases everything appeared to build correctly.

However, this is what I see in the bin dir:
[oo_processing@optics0 bin]$ ll *viirs*
cms_optics  936820 May 21 14:57 calibrate_viirs
cms_optics  925261 May 21 14:57 geolocate_viirs
cms_optics  155624 May 21 14:19 l1aextract_viirs
cms_optics 7299556 May 21 14:19 l2bin_viirs
cms_optics  728728 May 21 14:19 viirs_obc

NOTE that the two files (calibrate_viirs and geolocate_viirs) were compiled (see time stamps) and work.  l2bin_viirs was not compiled, but it seems to work without compiling.

BUT these two files (not built) still error out:
[oo_processing@optics0 bin]$ ./l1aextract_viirs
./l1aextract_viirs: /lib64/libc.so.6: version `GLIBC_2.14' not found (required by ./l1aextract_viirs)
[oo_processing@optics0 bin]$ ./viirs_obc
./viirs_obc: /lib64/libc.so.6: version `GLIBC_2.17' not found (required by ./viirs_obc)
./viirs_obc: /lib64/libc.so.6: version `GLIBC_2.14' not found (required by ./viirs_obc)

l1aextract_viirs is the first program I use in my VIIRS processing.

In fact, here is the bin dir: 14:19 is when I did the ./install_ocssw.py and anything after 14:56 in BOLD is newly compiled)
[oo_processing@optics0 bin]$ ll -ltr
total 80128                 
cms_optics    8848 May 21 14:19 fixrgb
cms_optics  155624 May 21 14:19 l1aextract_viirs
cms_optics      14 May 21 14:19 l1bgen -> l1bgen_generic
cms_optics 7299556 May 21 14:19 l2bin_viirs            
cms_optics  309648 May 21 14:19 smigen                 
cms_optics   27928 May 21 14:19 smitoppm               
cms_optics  728728 May 21 14:19 viirs_obc              
cms_optics   17872 May 21 14:19 bindepths              
cms_optics   44848 May 21 14:19 biosmap                
cms_optics   71880 May 21 14:19 interp_hycom_ascii     
cms_optics  105256 May 21 14:19 l0cnst_read_modis      
cms_optics   32336 May 21 14:19 l0info_seawifs         
cms_optics   22304 May 21 14:19 l0regen_seawifs        
cms_optics  439800 May 21 14:19 l1agen_seawifs         
cms_optics  165953 May 21 14:19 l1info_aquarius        
cms_optics  854350 May 21 14:19 l2bin_aquarius         
cms_optics 3731683 May 21 14:19 l2gen_aquarius         
cms_optics  123608 May 21 14:19 landbin                
cms_optics   23032 May 21 14:19 landtimebin            
cms_optics  512696 May 21 14:19 mk_aquarius_ancillary_data
cms_optics    9152 May 21 14:19 oisst_info               
cms_optics   14030 May 21 14:19 solar_xray               
cms_optics   13169 May 21 14:19 swh                      
cms_optics   13682 May 21 14:19 tec                      
cms_optics   13000 May 21 14:19 time_offset              
cms_optics   96916 May 21 14:56 l0fix_modis              
cms_optics  101714 May 21 14:56 l0cnst_write_modis       
cms_optics  102355 May 21 14:56 l0chunk_modis            
cms_optics   13933 May 21 14:56 pdsmerge                 
cms_optics   13958 May 21 14:56 pdsinfo                  
cms_optics   31600 May 21 14:56 l1aextract_modis
cms_optics   10171 May 21 14:56 geocheck_modis
cms_optics  121374 May 21 14:56 nccmp
cms_optics 2212508 May 21 14:56 l1bgen_modist
cms_optics 2210569 May 21 14:56 l1bgen_modisa
cms_optics   92602 May 21 14:56 atteph_info_modis
cms_optics 2720679 May 21 14:57 geogen_modis
cms_optics   77853 May 21 14:57 l1bextract_meris
cms_optics   41209 May 21 14:57 l1asubset_modis
cms_optics  925261 May 21 14:57 geolocate_viirs
cms_optics  936820 May 21 14:57 calibrate_viirs
cms_optics  133042 May 21 14:57 val_extract
cms_optics  134776 May 21 14:57 sstval_extract
cms_optics 1854756 May 21 14:57 l1agen_modis
cms_optics  231956 May 21 14:57 l2brsgen
cms_optics   52475 May 21 14:57 l1aextract_seawifs
cms_optics  110515 May 21 14:57 get_product_info
cms_optics  234560 May 21 14:57 l2mapgen
cms_optics  126546 May 21 14:57 l2extract
cms_optics 2393572 May 21 14:57 l2bin64
cms_optics 2389538 May 21 14:57 l2bin
cms_optics  310931 May 21 14:57 l3bin64
cms_optics  235783 May 21 14:57 l3rebin_meris64
cms_optics  237215 May 21 14:57 l3rebin_meris
cms_optics  306073 May 21 14:57 l3binmerge64
cms_optics  308828 May 21 14:57 l3binmerge
cms_optics  312427 May 21 14:57 l3bin
cms_optics  452184 May 21 14:57 l2binmatch64
cms_optics  453279 May 21 14:57 l2binmatch
cms_optics  597214 May 21 14:57 l3mapgen
cms_optics  375225 May 21 14:57 l3bindump64
cms_optics  376350 May 21 14:57 l3bindump
cms_optics  596963 May 21 14:57 l3mapgen64
cms_optics 2815728 May 21 14:57 l1info
cms_optics 2841197 May 21 14:58 lonlat2pixline
cms_optics 3231896 May 21 14:58 l1mapgen
cms_optics 3006753 May 21 14:58 l1bgen_generic
cms_optics 3232148 May 21 14:58 l1brsgen
cms_optics 4987669 May 21 14:59 l1det2det
cms_optics 4983649 May 21 14:59 vcalmerge
cms_optics 5070805 May 21 14:59 l3gen
cms_optics 5101189 May 21 14:59 l2gen
cms_optics 5068247 May 21 14:59 l3gen64

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OB SeaDAS - dshea
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Posts: 214
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SeaDAS 7.5 RedHat varients now useless?

by OB SeaDAS - dshea » Tue May 22, 2018 9:30 am America/New_York

Yea, the lawyers got in the way of l1aextract_viirs.  I'm working on a way put the IP (intellectual property) suspect code into a lib since we cannot release the source.  I'll get back to you on that one in a bit.

I think l2bin_viirs used to bin the SDR files from NOAA.  I'll remember to delete that one from everywhere.

don

OB SeaDAS - dshea
Subject Matter Expert
Subject Matter Expert
Posts: 214
Joined: Thu Mar 05, 2009 10:25 am America/New_York

SeaDAS 7.5 RedHat varients now useless?

by OB SeaDAS - dshea » Mon Jun 04, 2018 9:04 pm America/New_York

We have updated the binaries to work on CentOS 6 (and newer distros).  You should no longer have to compile to get things to work.
Let me know if you have any issues with the new binaries.

don

oo_processing
Posts: 208
Joined: Wed Apr 06, 2005 12:11 pm America/New_York

SeaDAS 7.5 RedHat varients now useless?

by oo_processing » Wed Jun 06, 2018 3:20 pm America/New_York

Don,
I have tested the binaries on CentOS6.9 and CentOS7.5, and on the RHEL 6.8 cluster environment. I have not run into any issues so far.
THANKS SO MUCH :eek: :grin: :smile:
Brock

OB SeaDAS - dshea
Subject Matter Expert
Subject Matter Expert
Posts: 214
Joined: Thu Mar 05, 2009 10:25 am America/New_York

SeaDAS 7.5 RedHat varients now useless?

by OB SeaDAS - dshea » Wed Jun 06, 2018 3:27 pm America/New_York

Thanks.  Building on a CentOS 6 machine for binary distribution seems to work for most flavors of linux.
I'm working on compiling instructions now.

don

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