SeaDAS toolbox beta gpt failing

[andrew.meredith]

I installed the SeaDAS toolbox beta with SNAP 7.0, but get the following error trying to execute a gpt graph that reprojects a L2 file. Things work fine from the GUI and using SNAP v6 without SeaDAS toolbox.

I'm running on RHEL 7. The input is a L2 generated by l2gen.

gpt -c 7G repro_graph.xml -t aqua.2019227.GL1.dim -f BEAM-DIMAP -Pfile=A2019227190500.GL1.L2

INFO: org.esa.snap.core.gpf.operators.tooladapter.ToolAdapterIO: Initializing external tool adapters
SEVERE: org.esa.s2tbx.dataio.gdal.activator.GDALDistributionInstaller: The environment variable LD_LIBRARY_PATH is not set. It must contain the current folder '.'.
INFO: org.esa.snap.core.util.EngineVersionCheckActivator: Please check regularly for new updates for the best SNAP experience.
Executing processing graph
done.
java.lang.NoClassDefFoundError: org/esa/snap/rcp/SnapApp
        at gov.nasa.gsfc.seadas.dataio.SeadasFileReader.<init>(SeadasFileReader.java:57)
        at gov.nasa.gsfc.seadas.dataio.L2FileReader.<init>(L2FileReader.java:45)
        at gov.nasa.gsfc.seadas.dataio.SeadasProductReader.readProductNodesImpl(SeadasProductReader.java:120)
        at org.esa.snap.core.dataio.AbstractProductReader.readProductNodes(AbstractProductReader.java:169)
        at org.esa.snap.core.gpf.common.ReadOp.initialize(ReadOp.java:117)
        at org.esa.snap.core.gpf.internal.OperatorContext.initializeOperator(OperatorContext.java:486)
        at org.esa.snap.core.gpf.internal.OperatorContext.getTargetProduct(OperatorContext.java:273)
        at org.esa.snap.core.gpf.Operator.getTargetProduct(Operator.java:387)
        at org.esa.snap.core.gpf.graph.NodeContext.initTargetProduct(NodeContext.java:77)
        at org.esa.snap.core.gpf.graph.GraphContext.initNodeContext(GraphContext.java:195)
        at org.esa.snap.core.gpf.graph.GraphContext.initNodeContext(GraphContext.java:178)
        at org.esa.snap.core.gpf.graph.GraphContext.initNodeContext(GraphContext.java:178)
        at org.esa.snap.core.gpf.graph.GraphContext.initOutput(GraphContext.java:162)
        at org.esa.snap.core.gpf.graph.GraphContext.<init>(GraphContext.java:91)
        at org.esa.snap.core.gpf.graph.GraphContext.<init>(GraphContext.java:64)
        at org.esa.snap.core.gpf.graph.GraphProcessor.executeGraph(GraphProcessor.java:128)
        at org.esa.snap.core.gpf.main.DefaultCommandLineContext.executeGraph(DefaultCommandLineContext.java:86)
        at org.esa.snap.core.gpf.main.CommandLineTool.executeGraph(CommandLineTool.java:534)
        at org.esa.snap.core.gpf.main.CommandLineTool.runGraph(CommandLineTool.java:388)
        at org.esa.snap.core.gpf.main.CommandLineTool.runGraphOrOperator(CommandLineTool.java:287)
        at org.esa.snap.core.gpf.main.CommandLineTool.run(CommandLineTool.java:188)
        at org.esa.snap.core.gpf.main.CommandLineTool.run(CommandLineTool.java:121)
        at org.esa.snap.core.gpf.main.GPT.run(GPT.java:54)
        at org.esa.snap.core.gpf.main.GPT.main(GPT.java:34)
        at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
        at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
        at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
        at java.lang.reflect.Method.invoke(Method.java:498)
        at org.esa.snap.runtime.Launcher.lambda$run$0(Launcher.java:55)
        at org.esa.snap.runtime.Engine.runClientCode(Engine.java:189)
        at org.esa.snap.runtime.Launcher.run(Launcher.java:51)
        at org.esa.snap.runtime.Launcher.main(Launcher.java:31)
        at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
        at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
        at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
        at java.lang.reflect.Method.invoke(Method.java:498)
        at com.exe4j.runtime.LauncherEngine.launch(LauncherEngine.java:65)
        at com.install4j.runtime.launcher.UnixLauncher.main(UnixLauncher.java:57)
Caused by: java.lang.ClassNotFoundException: org.esa.snap.rcp.SnapApp
        at java.net.URLClassLoader.findClass(URLClassLoader.java:382)
        at java.lang.ClassLoader.loadClass(ClassLoader.java:424)
        at java.lang.ClassLoader.loadClass(ClassLoader.java:357)
        ... 38 more

Error: org/esa/snap/rcp/SnapApp

Andrew
attachment 1

[OB SeaDAS - aynur]

Hi Andrew,

Thank you for reporting this problem. We've replicated the problem and have an idea about its cause. Please uninstall SeaDAS toolbox when using gpt for now. We will resolve this issue with the next SeaDAS Toolbox release.

Thanks,

Aynur