Seadas L2Gen Failed with Exit Code 1 OCI Data

[rodbager3579]

Hi-

I'm trying to process Rrs values from Pace Oci L1B data using L2gen tool in SeaDAS.

I recently managed to install SeaDAS via wsl on windows, I am trying to generate a L2 with the oci data for sargassum detection.




Reading foq file /home/lanot15/SeaDAS/ocssw/share/common/morel_fq.nc ndims=5 nvars=6 sds_id=5 var=foq


Closing foq file /home/lanot15/SeaDAS/ocssw/share/common/morel_fq.nc


Morel f/Q table from file /home/lanot15/SeaDAS/ocssw/share/common/morel_fq.nc

Applying ocean BRDF including:
Reflection/refraction for upwelling radiance.
Reflection/refraction for downwelling radiance.
Morel f/Q

Compute Raman scattering correction #2.

Loading Raman coefficients from: /home/lanot15/SeaDAS/ocssw/share/oci/raman.nc.
Warning: Cannot apply GMAO total extinction absorbing aerosol test without
anc_aerosol inputs defined
Setting absaer_opt=0

Reading aph* from /home/lanot15/SeaDAS/ocssw/share/common/aph_bricaud_1998.txt.
-E- Can not produce product Rrs_unc without setting proc_uncertainty

I would greatly appreciate your help, if possible, suggestions for working with OCI data.


-Rod

[OB SeaDAS - xuanyang02]

If you want to generate the product Rrs_unc, you may need to set proc_uncertainty=1

Screenshot 2024-09-23 at 3.29.34 PM.png (211.51 KiB) Not viewed yet

[rodbager3579]

-----------------------------------------------------------
Main Application Platform:
-----------------------------------------------------------
Application Version: SeaDAS 9.0.1
SNAP Engine Version: 11.0.0.0* (SeaDAS Platform modified)
SNAP Desktop Version: 11.0.0.0* (SeaDAS Platform modified)
SNAP Engine Build Date: 202405131445
SNAP Desktop Build Date: 202405131450
Installation Directory: /home/lanot15/SeaDAS
Data Directory: /home/lanot15/.seadas9
Configuration: /home/lanot15/SeaDAS/etc/snap.properties
VM Configuration: /home/lanot15/SeaDAS/etc/seadas.conf
VM Configuration: /home/lanot15/SeaDAS/etc/snap.conf
VM Configuration (gpt): /home/lanot15/SeaDAS/bin/gpt.vmoptions
VM Configuration (pconvert): /home/lanot15/SeaDAS/bin/pconvert.vmoptions
Runtime Configuration: /home/lanot15/.seadas9/etc/snap.properties
Runtime Configuration (SeaDAS Toolbox): /home/lanot15/.seadas9/etc/seadas.properties
JRE: OpenJDK Runtime Environment 11.0.19+7
JVM: OpenJDK 64-Bit Server VM by Eclipse Adoptium
Memory: 4096 MiB
OCSSWROOT (Java Env): null
Python3 Directory: /usr/bin/python3


-----------------------------------------------------------
SeaDAS Toolbox:
-----------------------------------------------------------
SeaDAS Toolbox Version: 2.0.0
SeaDAS Toolbox Build Date: 202405131459
Configuration: /home/lanot15/.seadas9/etc/seadas.properties
OCSSW Root Directory: /home/lanot15/SeaDAS/ocssw
OCSSW Docker Log Directory: /home/lanot15
OCSSW Location: local
Environment {$OCSSWROOT} (external): null


-----------------------------------------------------------
NASA Science Processing (OCSSW):
-----------------------------------------------------------
OCSSWROOT=/home/lanot15/SeaDAS/ocssw
OCDATAROOT=/home/lanot15/SeaDAS/ocssw/share
l2gen version: msl12 9.7.0-V2024.1 (Jul 17 2024 13:15:09)
l2bin version: 7.0.7
l3bin version: 5.14
l3mapgen version: l3mapgen 2.4.0-V2024.1 (Jul 17 2024 13:14:38)
Installed Missions: ['oci']


-----------------------------------------------------------
General System and Software:
-----------------------------------------------------------
Operating system: Ubuntu 22.04.5 LTS
Java version: 11.0.24
Python3 version: 3.10.12
Python3 Path: /usr/bin/python3
Env:
CC=gcc
CXX=g++
ELEMENTS=/home/lanot15/SeaDAS/ocssw/var/seawifs
EOS_LIB_PREFIX=linux64
FC=gfortran
GCC_TUNE=
HDFEOS_LIB=/home/lanot15/SeaDAS/ocssw/opt/EOS/lib/linux64
HRPT_STATION_IDENTIFICATION_FILE=/home/lanot15/SeaDAS/ocssw/share/seawifs/station/station_id.dat
L2GEN_ANC=/home/lanot15/SeaDAS/ocssw/var/anc
LIB3_BIN=/home/lanot15/SeaDAS/ocssw/opt/bin
LIB3_CHECK=0
LIB3_DIR=/home/lanot15/SeaDAS/ocssw/opt
LIB3_INC=/home/lanot15/SeaDAS/ocssw/opt/include
LIB3_LIB=/home/lanot15/SeaDAS/ocssw/opt/lib
NAVCTL=/home/lanot15/SeaDAS/ocssw/share/seawifs/nav
NAVQC=/home/lanot15/SeaDAS/ocssw/share/seawifs/nav
OCSSW_ARCH=linux_64
OCSSW_BIN=/home/lanot15/SeaDAS/ocssw/bin
OCSSW_DEBUG=0
OCSSW_MODIS=1
OCTS_REGISTRATION_TABLES=/home/lanot15/SeaDAS/ocssw/share/octs/nav
OCVARROOT=/home/lanot15/SeaDAS/ocssw/var
ORBCTL=/home/lanot15/SeaDAS/ocssw/share/seawifs/nav
PGSINC=/home/lanot15/SeaDAS/ocssw/opt/EOS/include
PGSLIB=/home/lanot15/SeaDAS/ocssw/opt/EOS/lib/linux64
PROJ_DATA=/home/lanot15/SeaDAS/ocssw/opt/share/proj
PROJ_LIB=/home/lanot15/SeaDAS/ocssw/opt/share/proj
SWFTBL=/home/lanot15/SeaDAS/ocssw/share/seawifs/qc
SWTBL=/home/lanot15/SeaDAS/ocssw/share/seawifs

[rodbager3579]

OB SeaDAS - xuanyang02 wrote:
> If you want to generate the product Rrs_unc, you may need to set
> proc_uncertainty=1Screenshot 2024-09-23 at 3.29.34 PM.png

I apreciatte your help.

I'm trying to generate reflectance for study the sargassum for my thesis, I understand that I need to generate a L2 from L1B for OCI

[OB.DAAC-EDL - amscott]

Here is some learning material available on the SeaDAS website:
https://seadas.gsfc.nasa.gov/tutorials/

I hope it helps!

[OB SeaDAS - xuanyang02]

Could you please provide the name of one of your OCI L1B files, so we can replicate the error? Thanks!

[rodbager3579]

This is the data that I am working

PACE_OCI.20240520T180124.L1B.V2.nc

-Rodrigo RaHe