OCSSW install error

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bschaeff
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OCSSW install error

by bschaeff » Thu Mar 09, 2017 10:23 am America/New_York

Hi,

We are running into problems installing OCSSW on a RedHat Linux release 6.8,  kernel x86_64. We've tried a manual install and get the following error:

Manual Install from ./install_ocssw.py --git-branch=7.3.2

Installing bundles.sha256sum (1 of 15)
--2017-03-08 17:29:36--  http://oceandata.sci.gsfc.nasa.gov/ocssw/bundles.sha256sum
Resolving oceandata.sci.gsfc.nasa.gov... xx.xxx.xx.xx, 2001:4d0:2418:128::84
Connecting to oceandata.sci.gsfc.nasa.gov|xx.xxx.xx.xx|:80... connected.
HTTP request sent, awaiting response... 301 Moved Permanently
Location: https://oceandata.sci.gsfc.nasa.gov/ocssw/bundles.sha256sum [following]
--2017-03-08 17:29:41--  https://oceandata.sci.gsfc.nasa.gov/ocssw/bundles.sha256sum
Connecting to oceandata.sci.gsfc.nasa.gov|xx.xxx.xx.xx|:443... connected.
HTTP request sent, awaiting response... 200 OK
Length: 2736 (2.7K) [text/plain]
Saving to: “bundles.sha256sum”

100%[==========================================================>] 2,736       --.-K/s   in 0s

2017-03-08 17:29:42 (158 MB/s) - “bundles.sha256sum” saved [2736/2736]

Installing common (2 of 15)
--2017-03-08 17:29:42--  http://oceandata.sci.gsfc.nasa.gov/ocssw/common.bundle
Resolving oceandata.sci.gsfc.nasa.gov... xx.xxx.xx.xx, 2001:4d0:2418:128::84
Connecting to oceandata.sci.gsfc.nasa.gov|xx.xxx.xx.xx|:80... connected.
HTTP request sent, awaiting response... 301 Moved Permanently
Location: https://oceandata.sci.gsfc.nasa.gov/ocssw/common.bundle [following]
--2017-03-08 17:29:47--  https://oceandata.sci.gsfc.nasa.gov/ocssw/common.bundle
Connecting to oceandata.sci.gsfc.nasa.gov|xx.xxx.xx.xx|:443... connected.
HTTP request sent, awaiting response... 200 OK
Length: 1270770080 (1.2G) [text/plain]
Saving to: “common.bundle”

100%[========================================================>] 1,270,770,080 59.4M/s   in 21s

2017-03-08 17:30:08 (57.7 MB/s) - “common.bundle” saved [1270770080/1270770080]

Initialized empty Git repository in /root/ocssw/run/data/common/.git/
fatal: git checkout: updating paths is incompatible with switching branches.
Did you intend to checkout 'remotes/origin/7.3.2' which can not be resolved as commit?
Error - Could not run "cd /root/ocssw/run/data/common; git checkout -t -b 7.3.2 remotes/origin/7.3.2 -q > /dev/null"


Any suggestions or help would be appreciated.

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OB SeaDAS - dshea
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OCSSW install error

by OB SeaDAS - dshea » Thu Mar 09, 2017 10:32 am America/New_York

SeaDAS 7.4 has been released.  Try the new one first.  Also, the branch should have been  --git-branch=7.3 (now 7.4)
It looks like you might be installing seadas as root which is not a good idea.

don

comachi
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OCSSW install error

by comachi » Mon Mar 20, 2017 4:47 pm America/New_York

Hi,

I installed SeaDAS 7.4 in Ubuntu 14.04 LTS and could not install OCSSW... nor through GUI or command mode. The error message is the same and copied in the bottom of the message.

Would you give me any help, please?
Many thanks.

Claudia

comachi@yara:~/seadas-7.4$ ./install_ocssw.py --install-dir=$HOME/ocssw --git-branch=v7.4 --aqua
Installing bundles.sha256sum (1 of 13)
--2017-03-20 17:34:37--  https://oceandata.sci.gsfc.nasa.gov/ocssw/bundles.sha256sum
Resolving oceandata.sci.gsfc.nasa.gov (oceandata.sci.gsfc.nasa.gov)... xx.xxx.xx.xx, 2001:4d0:2418:128::84
Connecting to oceandata.sci.gsfc.nasa.gov (oceandata.sci.gsfc.nasa.gov)|xx.xxx.xx.xx|:443... connected.
HTTP request sent, awaiting response... 200 OK
Length: 2736 (2.7K) [text/plain]
Saving to: ‘bundles.sha256sum’

100%[======================================>] 2,736       --.-K/s   in 0s     

2017-03-20 17:34:38 (456 MB/s) - ‘bundles.sha256sum’ saved [2736/2736]

Installing common (2 of 13)
--2017-03-20 17:34:38--  https://oceandata.sci.gsfc.nasa.gov/ocssw/common.bundle
Resolving oceandata.sci.gsfc.nasa.gov (oceandata.sci.gsfc.nasa.gov)... xx.xxx.xx.xx, 2001:4d0:2418:128::84
Connecting to oceandata.sci.gsfc.nasa.gov (oceandata.sci.gsfc.nasa.gov)|xx.xxx.xx.xx|:443... connected.
HTTP request sent, awaiting response... 200 OK
Length: 1270770080 (1.2G) [text/plain]
Saving to: ‘common.bundle’

100%[====================================>] 1,270,770,080 5.34MB/s   in 3m 16s

2017-03-20 17:37:54 (6.20 MB/s) - ‘common.bundle’ saved [1270770080/1270770080]

Cloning into '/home/comachi/ocssw/run/data/common'...
Receiving objects: 100% (182/182), 1.18 GiB | 11.04 MiB/s, done.
Resolving deltas: 100% (60/60), done.
Checking connectivity... done.
Checking out files: 100% (112/112), done.
fatal: unable to access 'https://oceandata.sci.gsfc.nasa.gov/ocssw/common.git/': gnutls_handshake() failed: Handshake failed
Error - Could not run "cd /home/comachi/ocssw/run/data/common; git fetch -q > /dev/null"

gnwiii
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OCSSW install error

by gnwiii » Tue Mar 21, 2017 6:25 am America/New_York

If you search for ubuntu and git you should see (2nd topic on my search): Update the ocssw processors failed with instructions for building git in Ubuntu 14.04.  This is a bit messy, so you might prefer to upgrade to Ubuntu 16.04 (LTS).

bschaeff
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OCSSW install error

by bschaeff » Tue Mar 21, 2017 1:29 pm America/New_York

The new version installs fine but when I run the seadas it now quits without any errors.

gnwiii
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OCSSW install error

by gnwiii » Tue Mar 21, 2017 2:18 pm America/New_York

When the seadas GUI misbehaves you can start it in debug mode (in a terminal) using "<seadas_install_dir>/bin/seadas-d.sh".  There may be hints in "<seadas_install_dir>/bin/stderr.log".  Look for files of the form "$HOME/hs_err*" (see Java Hotspot errors).   If you installed seadas as root you should know that some distros have limits on root access to GUI's (for security).  Are you using a current Oracle Java?  The following version "works for me":
$ java -version
java version "1.8.0_121"
Java(TM) SE Runtime Environment (build 1.8.0_121-b13)
Java HotSpot(TM) 64-Bit Server VM (build 25.121-b13, mixed mode)

siggy_12
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OCSSW install error

by siggy_12 » Tue Apr 03, 2018 7:32 am America/New_York

All network conditions are fine, please help me out with this problem:

fatal: unable to access 'https://oceandata.sci.gsfc.nasa.gov/ocssw/common.git/': Failed to connect to oceandata.sci.gsfc.nasa.gov port 443: Network is unreachable
Error - Could not run "cd /home/xyz/seadas-7.4/nstall-dir=/home/suresh/seadas-7.4/ocssw-git-branch=v7.5-local=~/Downloads/share/common; git fetch -q > /dev/null"

gnwiii
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OCSSW install error

by gnwiii » Tue Apr 03, 2018 7:54 am America/New_York

You need to mention your platform and how you ran the installer (GUI or command-line), see: How to Report Bugs Effectively  Are you trying to install manually from bundles (e.g., not using the install_ocssw.py scriopt)?  The error message is garbled, but seems to looking for the future v7.5 branch.  For SeaDAS 7.4 it should use the v7.4 branch, but there have been some problems with NASA's time machine that resulted in users getting some files from the future (e.g., v7.5). 

"All network conditions are fine" is highly optimistic.  The internet is constantly changing due to hardware problems, conjestion, malware attacks, etc.  To add to the difficulties, NASA's servers sometimes have problems, so what worked yesterday may not work today but will probably work tomorrow.

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